Sergiu Ivanov
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68afb6231a
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example: Update Threshold Boolean networks.
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2020-11-28 23:20:14 +01:00 |
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Sergiu Ivanov
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ce2d10526a
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example: Update Random functions and networks.
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2020-11-28 22:55:44 +01:00 |
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Sergiu Ivanov
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a1085d50b8
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example: Update Tabulating functions and networks.
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2020-11-26 23:26:53 +01:00 |
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Sergiu Ivanov
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dae4f6570f
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example: Update the section on Boolean networks.
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2020-11-26 23:20:44 +01:00 |
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Sergiu Ivanov
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097c5a7f09
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example: Update the presentation of the functions concerning the interaction graphs.
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2020-11-19 23:48:50 +01:00 |
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Sergiu Ivanov
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cde6ee30fa
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networks: build-interaction-graph → build-syntactic-interaction-graph.
The interaction graph is *not* usually defined in this way.
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2020-11-11 15:51:24 +01:00 |
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Sergiu Ivanov
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af581f91df
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example: Illustrate build-reduced-state-graph.
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2020-11-11 00:37:12 +01:00 |
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Sergiu Ivanov
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dbbfc74eaf
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rs: Don't implicitly complete all context sequences with empty contexts.
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2020-11-09 23:13:24 +01:00 |
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Sergiu Ivanov
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59c7108510
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networks: Add and illustrate sbn-interaction-graph.
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2020-11-08 22:56:46 +01:00 |
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Sergiu Ivanov
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bc9a2bd5f8
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networks: Add and illustrate pretty-print-tbn-interaction-graph.
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2020-11-08 22:30:29 +01:00 |
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Sergiu Ivanov
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7af1bb8d79
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networks: Add tbn-interaction-graph and explain in example.
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2020-11-08 20:29:00 +01:00 |
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Sergiu Ivanov
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a7a1ad49a1
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example: Illustrate printing TBN and SBN to Org tables.
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2020-11-04 00:07:08 +01:00 |
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Sergiu Ivanov
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e79fef9118
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networks: Add build-tbn-state-graph and use it in example.
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2020-10-23 00:17:36 +02:00 |
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Sergiu Ivanov
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485b859f34
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example: Show an example of read-org-sbn.
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2020-10-22 10:39:27 +02:00 |
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Sergiu Ivanov
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20b3357910
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example: Show how to build state graphs of TBN.
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2020-10-18 23:10:43 +02:00 |
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Sergiu Ivanov
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848142aa61
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example: Explain new SBF-related additions.
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2020-10-14 00:20:34 +02:00 |
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Sergiu Ivanov
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f37155fd3e
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networks: Add tbf/state-tabulate*.
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2020-10-12 00:47:54 +02:00 |
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Sergiu Ivanov
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7b3b31b211
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networks: Add print-org-tbfs/state.
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2020-10-12 00:24:10 +02:00 |
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Sergiu Ivanov
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f7ce78363e
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example: Fixes in the presentation of TBN/TBF.
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2020-10-12 00:13:08 +02:00 |
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Sergiu Ivanov
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f932841de3
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example: Reference the section on TBN from standalone TBF.
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2020-10-11 23:25:06 +02:00 |
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Sergiu Ivanov
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f06c5bc8ff
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example: Start explaining tbf/state and TBN.
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2020-10-11 23:22:37 +02:00 |
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Sergiu Ivanov
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63029af82f
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example: Add Passing values between code blocks.
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2020-07-20 23:57:16 +02:00 |
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Sergiu Ivanov
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0ac14e446c
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example: Typo.
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2020-07-20 18:05:03 +02:00 |
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Sergiu Ivanov
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e0329e2519
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example: Add some text about SBFs.
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2020-07-15 00:01:43 +02:00 |
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Sergiu Ivanov
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b1d9b5193e
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example: Add the section on TBF.
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2020-07-12 00:31:24 +02:00 |
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Sergiu Ivanov
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e654123a39
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example: Illustrate tabulate*/boolean.
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2020-05-31 23:42:16 +02:00 |
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Sergiu Ivanov
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45b7604c51
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example: Fix the usage of tabulate.
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2020-05-31 23:41:56 +02:00 |
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Sergiu Ivanov
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28a77d1e20
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example: Mention dds/functions.
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2020-05-28 00:30:27 +02:00 |
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Sergiu Ivanov
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1166132362
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example: Fix the prologue to correctly require dds.
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2020-05-23 23:52:32 +02:00 |
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Sergiu Ivanov
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76bff909e9
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example: Reran some code blocks in the section on reaction systems.
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2020-05-16 00:18:36 +02:00 |
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Sergiu Ivanov
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c5d2ff629c
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Explain how to install dds locally and use shorter require statements.
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2020-05-16 00:01:36 +02:00 |
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Sergiu Ivanov
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32b2e41634
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example: Explain how to read back and explore networks from Org tables.
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2020-05-08 23:33:43 +02:00 |
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Sergiu Ivanov
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cdca40eb40
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example: Random networks: unorg -> unorgv.
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2020-03-25 23:29:01 +01:00 |
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Sergiu Ivanov
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319b15d956
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networks: Remove ppsg and ppsgb.
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2020-03-25 23:15:37 +01:00 |
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Sergiu Ivanov
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e8e3a71d87
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networks: Remove nn.
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2020-03-25 23:05:28 +01:00 |
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Sergiu Ivanov
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dfb882d891
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networks: Remove st and stb.
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2020-03-25 00:31:23 +01:00 |
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Sergiu Ivanov
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a8a981098f
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utils: unorg -> unorgv
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2020-03-25 00:16:29 +01:00 |
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Sergiu Ivanov
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c4af42a2f6
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example: Update a call to build-boolean-signed-interaction-graph.
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2020-03-24 23:59:11 +01:00 |
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Sergiu Ivanov
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8bc2a582a6
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utils: Remove sgfy.
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2020-03-24 23:47:20 +01:00 |
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Sergiu Ivanov
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14688a9bae
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rs: Remove macros, update example.
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2020-03-24 23:22:20 +01:00 |
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Sergiu Ivanov
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b79bae9d67
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example: Update the randomly generated network.
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2020-03-22 21:03:20 +01:00 |
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Sergiu Ivanov
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b38bebb67b
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example: Add some examples for random functions and networks.
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2020-03-22 20:38:32 +01:00 |
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Sergiu Ivanov
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e7b35a451c
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Add the example on tabulating Boolean networks.
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2020-03-22 20:22:23 +01:00 |
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Sergiu Ivanov
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32d117a155
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example: Network functions -> Tabulating functions and networks.
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2020-03-22 19:36:07 +01:00 |
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Sergiu Ivanov
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572bef8a7b
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networks: Add tabulate and illustrate it in example.
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2020-03-15 16:12:35 +01:00 |
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Sergiu Ivanov
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f005d77516
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example: Explain setting network variables to constants.
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2020-03-04 23:51:11 +01:00 |
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Sergiu Ivanov
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f8dc65df0a
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example: Promote Reaction Systems to top-level heading.
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2020-03-04 18:21:20 +01:00 |
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Sergiu Ivanov
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2437dec620
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example: Explain why states for reaction systems include full context sequences.
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2020-03-03 01:03:33 +01:00 |
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Sergiu Ivanov
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cbdfdabe7a
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example: Illustrate building interactive processes.
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2020-03-03 01:01:21 +01:00 |
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Sergiu Ivanov
|
0d73b33ff3
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example: Some updates to the state graph of the reaction system.
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2020-03-03 01:01:00 +01:00 |