34 lines
1.5 KiB
Org Mode
34 lines
1.5 KiB
Org Mode
#+TITLE: Introduction to Cytoscape
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#+LANGUAGE: en
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#+ATTR_HTML: :alt in French :class lang-lifted
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[[file:../fr/cytoscape-intro.org][file:../content/imgs/fr.png]]
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#+ATTR_HTML: :alt return home :class home
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[[file:../index.org][file:../content/imgs/home.png]]
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This is a short (3 to 4 hours) lab session in which students learn
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some basic usage patterns of [[http://cytoscape.org/][Cytoscape]], a state of the art tool for
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analysis of biological networks. The lab assignment proposes following
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the [[http://manual.cytoscape.org/en/stable/Basic_Expression_Analysis_Tutorial.html#basic-expression-analysis-tutorial][Cytoscape tutorial]], one of the [[http://manual.cytoscape.org/en/stable/Styles.html#styles-tutorials][tutorials on styles]], and then
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requires the students to use Cytoscape to analyse a signalling pathway
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related to breast cancer and to formulate non-trivial conclusions.
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The slides defining the objectives of this lab session can be found
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[[file:../content/courses/cytoscape-intro/cytoscape-beam.pdf][here]].
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#+ATTR_HTML: :alt image of Creative Commons Attribution Alone licence :class ccby
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[[https://en.wikipedia.org/wiki/Creative_Commons_license][file:../content/imgs/ccby.png]]
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The materials of this course are distributed under the [[https://en.wikipedia.org/wiki/Creative_Commons_license][Creative
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Commons Attribution Alone licence]].
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* Local Variables :noexport:
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# Local Variables:
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# org-link-file-path-type: relative
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# eval: (auto-fill-mode)
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# ispell-local-dictionary: "en"
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# End:
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