Commit graph

579 commits

Author SHA1 Message Date
Sergiu Ivanov
38660cc0a5 sbn-interaction-graph: Use zero-edges and declare it in the contract. 2021-08-04 17:33:17 +02:00
Sergiu Ivanov
ab2c37125c Minor updates to some figures. 2021-08-04 17:31:16 +02:00
Sergiu Ivanov
1f3ab98faa Move submitting =update-graph= higher on the list of priorities. 2021-05-31 08:46:57 +02:00
Sergiu Ivanov
40909995ba Add the TODO item about implementing monotone?. 2021-05-31 08:46:36 +02:00
Sergiu Ivanov
ac0e5310d5 README: Add the TODO about define-pbf. 2021-05-20 10:45:59 +02:00
Sergiu Ivanov
096f21a47f Remove hash-intersect.
This function was merged into Racket.
2021-04-29 20:50:26 +02:00
Sergiu Ivanov
c7912705ca README.org: Update the roadmap. 2020-11-29 23:29:39 +01:00
Sergiu Ivanov
485aa4ca95 README.org: Update the roadmap. 2020-11-29 23:11:18 +01:00
Sergiu Ivanov
7f0d261e98 utils.scrbl: Add eval-with. 2020-11-29 23:07:40 +01:00
Sergiu Ivanov
b8fcfb2374 doc: Add proper requires to Scribble files. 2020-11-29 22:16:23 +01:00
Sergiu Ivanov
157c226259 rs.scrbl: Add module-level definitions. 2020-11-29 22:12:01 +01:00
Sergiu Ivanov
532f7b180e networks.scrbl: Add an explicit tag to Basic definitions.
Otherwise there is a conflict with a section with the same name in
rs.scrbl.
2020-11-29 22:11:03 +01:00
Sergiu Ivanov
d95891537b doc: Add module-level comments for networks. 2020-11-29 22:01:18 +01:00
Sergiu Ivanov
96f8782d7b doc: Add module-level comments for functions. 2020-11-29 21:45:33 +01:00
Sergiu Ivanov
d014209a98 doc: Add module-level comments for utils. 2020-11-29 21:41:00 +01:00
Sergiu Ivanov
af6bb09f53 docs: Add the introduction to dds. 2020-11-29 20:59:16 +01:00
Sergiu Ivanov
e2788be237 Add the Scribble files for almost all modules.
The generics module will probably disappear or take a different shape
in the near future.
2020-11-29 17:43:20 +01:00
Sergiu Ivanov
8487b64287 Rename manual → dds. 2020-11-29 17:15:24 +01:00
Sergiu Ivanov
596e1b7b5d Prepare for writing the documentation. 2020-11-29 00:28:46 +01:00
Sergiu Ivanov
12cc862c94 Start the documentation. 2020-11-29 00:02:06 +01:00
Sergiu Ivanov
ae21ea6464 README: Update the roadmap. 2020-11-28 23:26:03 +01:00
Sergiu Ivanov
34fe8a8316 Merge branch 'network-domains' 2020-11-28 23:21:34 +01:00
Sergiu Ivanov
68afb6231a example: Update Threshold Boolean networks. 2020-11-28 23:20:14 +01:00
Sergiu Ivanov
d7d3717c83 networks: Fix build-tbn-state-graph. 2020-11-28 23:12:49 +01:00
Sergiu Ivanov
6c30120376 networks: Remove 01-related state graph functions.
Remove build-full-01-state-graph and
build-full-01-state-graph-annotated.
2020-11-28 23:10:18 +01:00
Sergiu Ivanov
5419278462 networks,tbn->network: Use make-01-network.
Also add some tests.
2020-11-28 23:05:56 +01:00
Sergiu Ivanov
c0ec7369fd networks: Add make-01-network. 2020-11-28 23:01:57 +01:00
Sergiu Ivanov
ce2d10526a example: Update Random functions and networks. 2020-11-28 22:55:44 +01:00
Sergiu Ivanov
5fc4875adf networks: Make table->network infer the domains. 2020-11-28 22:46:43 +01:00
Sergiu Ivanov
a1085d50b8 example: Update Tabulating functions and networks. 2020-11-26 23:26:53 +01:00
Sergiu Ivanov
83deda31a9 example: Stage a forgotten figure. 2020-11-26 23:20:58 +01:00
Sergiu Ivanov
dae4f6570f example: Update the section on Boolean networks. 2020-11-26 23:20:44 +01:00
Sergiu Ivanov
8f9740d2d7 network: Fix the tests for interaction graphs. 2020-11-26 22:36:19 +01:00
Sergiu Ivanov
cdb2149358 network: Fix table->network. 2020-11-26 22:25:25 +01:00
Sergiu Ivanov
a074258b1a networks: Rename and generalize state graph functions.
build-full-state-graph and build-full-state-graph-annotated now
retrieve the domains from the network and are not limited to Boolean
state graphs.
2020-11-26 22:13:57 +01:00
Sergiu Ivanov
34ceccc446 networks: Fix build-syntactic-interaction-graph. 2020-11-23 23:16:11 +01:00
Sergiu Ivanov
fbd6ded717 networks: Fix list-syntactic-interactions. 2020-11-23 23:09:23 +01:00
Sergiu Ivanov
0a4035d9f7 networks: Fix the tests of make-boolean-network-form. 2020-11-22 23:00:26 +01:00
Sergiu Ivanov
f016fbb0ca networks: Fix the tests for network-form->network. 2020-11-22 22:58:21 +01:00
Sergiu Ivanov
354fad2b1d network: Roll back update to its previous version.
I thought I was clever to rewrite update using for/hash, but in fact
this new version only included the updated variables in the new
state :D
2020-11-22 22:50:29 +01:00
Sergiu Ivanov
3abf548ac2 networks: Bug in update. 2020-11-22 22:44:04 +01:00
Sergiu Ivanov
eb3e851a9d networks: Make network and network-form transparent. 2020-11-22 22:38:45 +01:00
Sergiu Ivanov
ff6fa2c88b network: Fix the test for make-boolean-network. 2020-11-22 22:11:25 +01:00
Sergiu Ivanov
b38adc89cf networks: Don't use tabulate-boolean-network. 2020-11-22 22:08:45 +01:00
Sergiu Ivanov
e4751c6ed2 networks: Don't re-export network-form?. 2020-11-22 22:05:41 +01:00
Sergiu Ivanov
0085eb964b networks: Fix make-boolean-network. 2020-11-22 22:02:56 +01:00
Sergiu Ivanov
5475bc5fbf networks: Fix Random networks. 2020-11-22 21:58:00 +01:00
Sergiu Ivanov
2c68055818 networks: Fix constructing functions and networks. 2020-11-22 21:42:41 +01:00
Sergiu Ivanov
3a2453c92e networks: Fix tabulating functions and networks. 2020-11-22 21:41:06 +01:00
Sergiu Ivanov
fd651ba4cc network,Dynamics: Fixes. 2020-11-22 21:35:19 +01:00