Sergiu Ivanov
511aa60c31
Show off some examples of Boolean networks.
2020-02-22 21:01:06 +01:00
Sergiu Ivanov
3ff1b645d5
utils: Add dotit.
2020-02-22 21:00:34 +01:00
Sergiu Ivanov
8357f70304
utils: Generalise the comment to the section on interaction with Org-mode.
2020-02-22 20:53:13 +01:00
Sergiu Ivanov
e8af2055e6
Add example.org and an accompanying picture.
2020-02-22 20:34:24 +01:00
Sergiu Ivanov
576f204846
utils: Add unorg.
2020-02-22 19:48:39 +01:00
Sergiu Ivanov
ea77374933
utils: Make unstringify-pairs return a hash map instead of a list of pairs.
...
Adapt the test code accordingly.
2020-02-22 19:20:45 +01:00
Sergiu Ivanov
286a75c8ba
utils: Add read-org-variable-mapping.
2020-02-22 19:15:39 +01:00
Sergiu Ivanov
eacd2a07a0
utils: Also generalise the contract of unstringify-pairs.
2020-02-22 19:14:46 +01:00
Sergiu Ivanov
a2b8df2a67
utils: Generalise unstringify-pairs to accept both proper and improper pairs.
2020-02-22 18:58:19 +01:00
Sergiu Ivanov
5b4d39a1b0
utils: Add unstringify-pairs.
2020-02-22 12:27:28 +01:00
Sergiu Ivanov
fed1f65abd
utils: Add read-org-table.
2020-02-22 12:18:37 +01:00
Sergiu Ivanov
7d52533f74
utils: variable-mapping-stringify -> stringify-variable-mapping.
2020-02-22 12:12:57 +01:00
Sergiu Ivanov
1eb48bc5e2
utils: Add string->any.
2020-02-22 12:11:37 +01:00
Sergiu Ivanov
e37aeca9e7
Generalise the comment to Variable mapping and Org-mode.
2020-02-22 12:08:39 +01:00
Sergiu Ivanov
3a3c0e2d4d
utils: Add sgfy.
2020-02-22 10:40:40 +01:00
Sergiu Ivanov
8dfa11b17c
networks: Say contracts are contract?.
2020-02-22 10:37:37 +01:00
Sergiu Ivanov
5ee517ec2d
utils: Add a separate section for contracts in provide.
2020-02-22 10:36:03 +01:00
Sergiu Ivanov
2dd9e9e575
utils: Use hash/c instead of hash-pred.
...
Also remove hash-pred.
2020-02-22 10:35:01 +01:00
Sergiu Ivanov
184727f5b4
utils: Add variable-mapping-stringify and string-variable-mapping?.
2020-02-22 10:29:34 +01:00
Sergiu Ivanov
7f6c8703a9
utils: Add any->string.
2020-02-21 18:01:08 +01:00
Sergiu Ivanov
038e543eff
networks: Add build-interaction-graph.
2020-02-20 15:56:48 +01:00
Sergiu Ivanov
cd714773be
lambda -> λ
2020-02-20 15:36:29 +01:00
Sergiu Ivanov
75bf044fd8
networks: Add list-interactions.
2020-02-20 15:17:32 +01:00
Sergiu Ivanov
71f979808c
hash-pred: Generalise and simplify.
2020-02-20 14:47:06 +01:00
Sergiu Ivanov
6001762cb8
utils: Restructure the exports.
2020-02-20 14:19:30 +01:00
Sergiu Ivanov
768fa7aabc
networks: Restructure the exports slightly.
2020-02-20 14:13:48 +01:00
Sergiu Ivanov
cf19859be8
Rewrite bn without types, rename it to networks.
...
I tried generalising my code from Boolean networks to any kinds of
networks, but got tired of having to fight the type system (for now at
least). The last drop was the fact that the graph library does not
seem to have a typed version. So I decided to go with contracts
instead.
2020-02-20 00:56:30 +01:00
Sergiu Ivanov
009c6109a9
utils: Add hash-pred and use it in variable-mapping?
2020-02-20 00:22:38 +01:00
Sergiu Ivanov
d94f72b1a5
utils: Export variable-mapping?
2020-02-19 23:37:32 +01:00
Sergiu Ivanov
07a9ad2ac5
utils: Restructure the provides.
2020-02-19 23:37:06 +01:00
Sergiu Ivanov
5dbdde1610
utils: Add a comment to variable-mapping?
2020-02-19 23:28:27 +01:00
Sergiu Ivanov
808516081d
utils: Add variable-mapping?.
2020-02-19 23:25:00 +01:00
Sergiu Ivanov
ae7b9553de
utils: Don't export eval-with1 any more.
...
It was useful with types, but it isn't any more.
2020-02-19 23:12:58 +01:00
Sergiu Ivanov
a4deb44d10
utils: Add contracts to the functions.
2020-02-19 23:12:18 +01:00
Sergiu Ivanov
bdff8e31c9
eval-with: Explicitly say that the evaluation happens in a fresh namespace.
2020-02-19 22:51:49 +01:00
Sergiu Ivanov
404362a91c
utils: Remove type annotations.
...
I am very early in my project, and I have already spent literal days
trying to make the types fit together.
I'm trying contracts next.
2020-02-19 22:49:50 +01:00
Sergiu Ivanov
9cbfcfca4b
utils: Add extract-symbols.
2020-02-19 22:11:44 +01:00
Sergiu Ivanov
1a174ad8e0
utils-tests: Add section titles.
2020-02-19 22:09:09 +01:00
Sergiu Ivanov
0ae8537bdf
bn: Introduce the section on interaction graphs.
2020-02-18 12:52:20 +01:00
Sergiu Ivanov
cf2cc484bf
bn: Add st.
2020-02-18 12:39:11 +01:00
Sergiu Ivanov
f4d7197f47
bn: Better structure provide.
2020-02-18 12:36:44 +01:00
Sergiu Ivanov
74b57c81d7
bn: Add syntax bn.
2020-02-18 12:36:26 +01:00
Sergiu Ivanov
6ef7483bd2
bn: Remove some extra module code at the bottom.
2020-02-18 12:21:12 +01:00
Sergiu Ivanov
58e40e44ad
bn-tests: Restructure.
...
Also make the names of test cases correspond to the names of the
sections in bn.
2020-02-18 12:20:32 +01:00
Sergiu Ivanov
f0a7c270e9
bn: Add make-bn-forms.
2020-02-18 12:16:03 +01:00
Sergiu Ivanov
608b606717
bn: make-bn -> make-bn-funcs.
2020-02-18 12:09:07 +01:00
Sergiu Ivanov
35abded486
bn: Add bn-form->bn.
2020-02-18 12:07:38 +01:00
Sergiu Ivanov
7a4dd09f40
bn: Add update-func-form->update-func.
2020-02-18 11:41:16 +01:00
Sergiu Ivanov
a061e2d7bc
bn: Add some types for syntactic description of Boolean networks.
2020-02-18 11:40:41 +01:00
Sergiu Ivanov
912fe95891
utils: Better highlight section titles.
2020-02-18 00:00:18 +01:00
