Commit graph

212 commits

Author SHA1 Message Date
Sergiu Ivanov
83a87acfc5 utils: Generalise unstringify-pairs. 2020-02-23 21:29:00 +01:00
Sergiu Ivanov
9e0db04035 networks: Make nn a shortcut form network-form->network.
It used to be for make-network-from-forms, but nn is more practical in
my Org-mode setup as of now.
2020-02-23 20:28:11 +01:00
Sergiu Ivanov
b0acbadadd networks: Add build-all-boolean-states and build-full-boolean-state-graph. 2020-02-23 20:13:37 +01:00
Sergiu Ivanov
f88bc0d01b networks: Add further infrastructure for pretty-printing networks. 2020-02-23 19:44:55 +01:00
Sergiu Ivanov
3a873ab256 networks: Add pretty-print-state. 2020-02-23 19:24:53 +01:00
Sergiu Ivanov
4063a21bce utils: Add update-vertices/unweighted. 2020-02-23 19:17:16 +01:00
Sergiu Ivanov
39575f39c2 generic: Add dds-build-state-graph and dds-build-n-step-state-graph.
Also provide a common fallback implementation.
2020-02-23 18:51:57 +01:00
Sergiu Ivanov
ef76e143f2 network-tests: Factor out a convenient set of states. 2020-02-23 15:09:02 +01:00
Sergiu Ivanov
a26ce5aebc generic: Say which methods have no fallback. 2020-02-23 15:05:06 +01:00
Sergiu Ivanov
e7eb1fb09e networks: Implement dds-step-one-annotated. 2020-02-23 14:11:55 +01:00
Sergiu Ivanov
afb97eae7c generic: Add dds-step-one-annotated. 2020-02-23 14:11:38 +01:00
Sergiu Ivanov
5969595bed networks: Add and use modality? 2020-02-23 13:53:02 +01:00
Sergiu Ivanov
95d248c548 networks, generic: Make all set/c arguments 'dont-care. 2020-02-23 13:38:18 +01:00
Sergiu Ivanov
fea113c1dd generic: Fix fallback-dds-step. 2020-02-23 13:36:49 +01:00
Sergiu Ivanov
8c92a4bbd8 networks, generic: Add dds-step. 2020-02-23 13:29:09 +01:00
Sergiu Ivanov
598904fecd networks: Fix an extra newline in provides. 2020-02-23 12:27:59 +01:00
Sergiu Ivanov
5907edfef0 dds-step -> dds-step-one 2020-02-23 12:23:55 +01:00
Sergiu Ivanov
c79c23ada3 generic: Fix the order of parameters in the comment for dds-step. 2020-02-23 12:21:08 +01:00
Sergiu Ivanov
5d5d0347e8 networks: Make dynamics inherit from dds and implement dds-step. 2020-02-23 12:19:47 +01:00
Sergiu Ivanov
9e818ad2bf generic: Add. 2020-02-23 12:19:37 +01:00
Sergiu Ivanov
f9191287e1 networks: Make update accept any kind of sets of variables. 2020-02-23 12:10:27 +01:00
Sergiu Ivanov
cbf949ba5a network: Use domain-mapping/c in the contract of make-same-domains. 2020-02-23 11:51:59 +01:00
Sergiu Ivanov
dedfddfe55 networks: Add make-dynamics-from-func, make-asyn-dynamics, make-syn-dynamics. 2020-02-23 11:42:01 +01:00
Sergiu Ivanov
c9cbb1c951 networks: Add make-syn and make-asyn. 2020-02-23 11:25:19 +01:00
Sergiu Ivanov
2fa89f05b9 networks: Start section Dynamics of networks. 2020-02-23 11:10:35 +01:00
Sergiu Ivanov
9f4fae1437 example.org: Illustrate signed interaction graphs. 2020-02-23 10:14:32 +01:00
Sergiu Ivanov
2d0e688425 networks: Add build-boolean-signed-interaction-graph. 2020-02-23 10:00:48 +01:00
Sergiu Ivanov
b04d897c67 Remove extra comments at the end of networks. 2020-02-23 09:26:07 +01:00
Sergiu Ivanov
04bc619b7d network-tests: Compare hash tables directly.
These comparisons wouldn't work before because I was using mutable
hashes.
2020-02-23 09:25:08 +01:00
Sergiu Ivanov
4a6888ddde networks: Rewrite update for immutable hashes. 2020-02-23 09:19:45 +01:00
Sergiu Ivanov
1492c33e1a networks: Remove build-all-states-same-domain.
This is function is not really necessary, since I have
make-same-domains.
2020-02-23 09:13:03 +01:00
Sergiu Ivanov
245b22316e networks: Add and use domain-mapping/c. 2020-02-23 09:12:01 +01:00
Sergiu Ivanov
bdbbae6eb6 networks: Make build-all-state take a hash as the domain mapping.
It used to take a list of pairs.
2020-02-23 09:09:43 +01:00
Sergiu Ivanov
5a27469dce utils: Slightly streamline extract-symbols with match. 2020-02-23 09:00:54 +01:00
Sergiu Ivanov
9eca7bf449 Prefer for, for/list, and for/hash for iterating over hashes. 2020-02-23 08:57:50 +01:00
Sergiu Ivanov
5fd1b95d5c networks: Fix the comments for make-state and make-network-from-functions. 2020-02-23 08:47:16 +01:00
Sergiu Ivanov
daf2e079ae networks: Add build-signed-interaction-graph. 2020-02-23 01:00:09 +01:00
Sergiu Ivanov
798178852c networks-test: Use make-boolean-domains. 2020-02-23 00:55:34 +01:00
Sergiu Ivanov
251a7dcf23 networks: make-same-domain-mapping -> make-same-domains, make-boolean-domain-mapping -> make-boolean-domains 2020-02-23 00:15:18 +01:00
Sergiu Ivanov
183160da6f networks: Add make-same-domain-mapping and make-boolean-domain-mapping. 2020-02-23 00:13:36 +01:00
Sergiu Ivanov
cf676028d3 networks, update: Don't talk about Boolean networks. 2020-02-23 00:05:04 +01:00
Sergiu Ivanov
fbef580a01 networks: Add get-interaction-sign. 2020-02-23 00:04:19 +01:00
Sergiu Ivanov
c2c87d0a7d network: Create immutable hashes by default. 2020-02-22 23:22:43 +01:00
Sergiu Ivanov
ac8e63c5f4 networks: Make the state an immutable hash table by default. 2020-02-22 23:20:10 +01:00
Sergiu Ivanov
25a88c820a networks: Add build-all-states-same-domain. 2020-02-22 22:41:56 +01:00
Sergiu Ivanov
da3f25922a networks: Add build-all-states. 2020-02-22 22:31:05 +01:00
Sergiu Ivanov
511aa60c31 Show off some examples of Boolean networks. 2020-02-22 21:01:06 +01:00
Sergiu Ivanov
3ff1b645d5 utils: Add dotit. 2020-02-22 21:00:34 +01:00
Sergiu Ivanov
8357f70304 utils: Generalise the comment to the section on interaction with Org-mode. 2020-02-22 20:53:13 +01:00
Sergiu Ivanov
e8af2055e6 Add example.org and an accompanying picture. 2020-02-22 20:34:24 +01:00