example.org: Add examples of state graphs.
This commit is contained in:
Sergiu Ivanov
parent
5f4cb917bc
commit
e3a04cb765
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@ -0,0 +1,164 @@
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</g>
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||||
<!-- node1->node1 -->
|
||||
<g id="edge3" class="edge">
|
||||
<title>node1->node1</title>
|
||||
<path fill="none" stroke="black" d="M599.67,-538.59C612.36,-538.03 621.68,-535.82 621.68,-531.99 621.68,-528.16 612.36,-525.96 599.67,-525.39"/>
|
||||
</g>
|
||||
<!-- node2 -->
|
||||
<g id="node3" class="node">
|
||||
<title>node2</title>
|
||||
<ellipse fill="none" stroke="black" cx="259.79" cy="-530.51" rx="59.29" ry="18"/>
|
||||
<text text-anchor="middle" x="259.79" y="-526.81" font-family="Times-Roman" font-size="14.00">a:0 c:1 b:1</text>
|
||||
</g>
|
||||
<!-- node1->node2 -->
|
||||
<g id="edge12" class="edge">
|
||||
<title>node1->node2</title>
|
||||
<path fill="none" stroke="black" d="M485.19,-531.68C439.79,-531.45 377.07,-531.12 329.32,-530.87"/>
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<polygon fill="black" stroke="black" points="329.08,-527.37 319.06,-530.82 329.04,-534.37 329.08,-527.37"/>
|
||||
</g>
|
||||
<!-- node2->node2 -->
|
||||
<g id="edge4" class="edge">
|
||||
<title>node2->node2</title>
|
||||
<path fill="none" stroke="black" d="M314.92,-537.11C327.61,-536.54 336.94,-534.34 336.94,-530.51 336.94,-526.68 327.61,-524.47 314.92,-523.91"/>
|
||||
</g>
|
||||
<!-- node4 -->
|
||||
<g id="node5" class="node">
|
||||
<title>node4</title>
|
||||
<ellipse fill="none" stroke="black" cx="489.78" cy="-276.18" rx="59.29" ry="18"/>
|
||||
<text text-anchor="middle" x="489.78" y="-272.48" font-family="Times-Roman" font-size="14.00">a:1 c:1 b:1</text>
|
||||
</g>
|
||||
<!-- node2->node4 -->
|
||||
<g id="edge13" class="edge">
|
||||
<title>node2->node4</title>
|
||||
<path fill="none" stroke="black" d="M275.6,-513.03C315.48,-468.92 420.31,-353 466.9,-301.48"/>
|
||||
<polygon fill="black" stroke="black" points="469.75,-303.55 473.86,-293.78 464.55,-298.85 469.75,-303.55"/>
|
||||
</g>
|
||||
<!-- node6 -->
|
||||
<g id="node7" class="node">
|
||||
<title>node6</title>
|
||||
<ellipse fill="none" stroke="black" cx="59.14" cy="-272.72" rx="59.29" ry="18"/>
|
||||
<text text-anchor="middle" x="59.14" y="-269.02" font-family="Times-Roman" font-size="14.00">a:0 c:0 b:1</text>
|
||||
</g>
|
||||
<!-- node2->node6 -->
|
||||
<g id="edge5" class="edge">
|
||||
<title>node2->node6</title>
|
||||
<path fill="none" stroke="black" d="M246,-512.79C209.35,-465.69 109.8,-337.8 73.03,-290.56"/>
|
||||
</g>
|
||||
<!-- node3 -->
|
||||
<g id="node4" class="node">
|
||||
<title>node3</title>
|
||||
<ellipse fill="none" stroke="black" cx="548.13" cy="-19.23" rx="59.29" ry="18"/>
|
||||
<text text-anchor="middle" x="548.13" y="-15.53" font-family="Times-Roman" font-size="14.00">a:1 c:0 b:0</text>
|
||||
</g>
|
||||
<!-- node3->node0 -->
|
||||
<g id="edge14" class="edge">
|
||||
<title>node3->node0</title>
|
||||
<path fill="none" stroke="black" d="M532.35,-36.73C492.54,-80.88 387.91,-196.94 341.41,-248.51"/>
|
||||
<polygon fill="black" stroke="black" points="338.57,-246.45 334.47,-256.22 343.77,-251.13 338.57,-246.45"/>
|
||||
</g>
|
||||
<!-- node3->node3 -->
|
||||
<g id="edge6" class="edge">
|
||||
<title>node3->node3</title>
|
||||
<path fill="none" stroke="black" d="M603.25,-25.83C615.95,-25.26 625.27,-23.06 625.27,-19.23 625.27,-15.4 615.95,-13.2 603.25,-12.63"/>
|
||||
</g>
|
||||
<!-- node7 -->
|
||||
<g id="node8" class="node">
|
||||
<title>node7</title>
|
||||
<ellipse fill="none" stroke="black" cx="749.46" cy="-276.71" rx="59.29" ry="18"/>
|
||||
<text text-anchor="middle" x="749.46" y="-273.01" font-family="Times-Roman" font-size="14.00">a:1 c:1 b:0</text>
|
||||
</g>
|
||||
<!-- node3->node7 -->
|
||||
<g id="edge7" class="edge">
|
||||
<title>node3->node7</title>
|
||||
<path fill="none" stroke="black" d="M561.96,-36.93C598.74,-83.97 698.63,-211.71 735.52,-258.89"/>
|
||||
</g>
|
||||
<!-- node4->node4 -->
|
||||
<g id="edge8" class="edge">
|
||||
<title>node4->node4</title>
|
||||
<path fill="none" stroke="black" d="M544.9,-282.78C557.6,-282.21 566.92,-280.01 566.92,-276.18 566.92,-272.35 557.6,-270.15 544.9,-269.58"/>
|
||||
</g>
|
||||
<!-- node5 -->
|
||||
<g id="node6" class="node">
|
||||
<title>node5</title>
|
||||
<ellipse fill="none" stroke="black" cx="263.87" cy="-18" rx="59.29" ry="18"/>
|
||||
<text text-anchor="middle" x="263.87" y="-14.3" font-family="Times-Roman" font-size="14.00">a:1 c:0 b:1</text>
|
||||
</g>
|
||||
<!-- node4->node5 -->
|
||||
<g id="edge9" class="edge">
|
||||
<title>node4->node5</title>
|
||||
<path fill="none" stroke="black" d="M474.25,-258.44C432.88,-211.16 320.36,-82.56 279.21,-35.53"/>
|
||||
</g>
|
||||
<!-- node4->node7 -->
|
||||
<g id="edge15" class="edge">
|
||||
<title>node4->node7</title>
|
||||
<path fill="none" stroke="black" d="M549.03,-276.3C587.94,-276.38 639.01,-276.49 679.86,-276.57"/>
|
||||
<polygon fill="black" stroke="black" points="680,-280.07 690.01,-276.59 680.02,-273.07 680,-280.07"/>
|
||||
</g>
|
||||
<!-- node5->node3 -->
|
||||
<g id="edge16" class="edge">
|
||||
<title>node5->node3</title>
|
||||
<path fill="none" stroke="black" d="M323.11,-18.26C368.44,-18.45 431.05,-18.72 478.72,-18.93"/>
|
||||
<polygon fill="black" stroke="black" points="478.94,-22.43 488.96,-18.98 478.97,-15.43 478.94,-22.43"/>
|
||||
</g>
|
||||
<!-- node5->node5 -->
|
||||
<g id="edge10" class="edge">
|
||||
<title>node5->node5</title>
|
||||
<path fill="none" stroke="black" d="M319,-24.6C331.69,-24.03 341.01,-21.83 341.01,-18 341.01,-14.17 331.69,-11.97 319,-11.4"/>
|
||||
</g>
|
||||
<!-- node6->node0 -->
|
||||
<g id="edge17" class="edge">
|
||||
<title>node6->node0</title>
|
||||
<path fill="none" stroke="black" d="M118.34,-272.97C157.22,-273.14 208.24,-273.36 249.05,-273.54"/>
|
||||
<polygon fill="black" stroke="black" points="249.18,-277.04 259.19,-273.58 249.21,-270.04 249.18,-277.04"/>
|
||||
</g>
|
||||
<!-- node6->node5 -->
|
||||
<g id="edge18" class="edge">
|
||||
<title>node6->node5</title>
|
||||
<path fill="none" stroke="black" d="M73.22,-255.21C108.64,-211.13 201.65,-95.41 243.25,-43.66"/>
|
||||
<polygon fill="black" stroke="black" points="246.16,-45.62 249.7,-35.63 240.71,-41.23 246.16,-45.62"/>
|
||||
</g>
|
||||
<!-- node7->node1 -->
|
||||
<g id="edge19" class="edge">
|
||||
<title>node7->node1</title>
|
||||
<path fill="none" stroke="black" d="M735.37,-294.26C699.91,-338.43 606.81,-454.41 565.18,-506.28"/>
|
||||
<polygon fill="black" stroke="black" points="562.25,-504.33 558.72,-514.32 567.71,-508.72 562.25,-504.33"/>
|
||||
</g>
|
||||
<!-- node7->node7 -->
|
||||
<g id="edge11" class="edge">
|
||||
<title>node7->node7</title>
|
||||
<path fill="none" stroke="black" d="M804.58,-283.31C817.28,-282.74 826.6,-280.54 826.6,-276.71 826.6,-272.88 817.28,-270.68 804.58,-270.11"/>
|
||||
</g>
|
||||
</g>
|
||||
</svg>
|
||||
|
After Width: | Height: | Size: 7.4 KiB |
|
|
@ -361,6 +361,72 @@ tab
|
|||
b becomes (not a) (negative interaction). Therefore, the influence
|
||||
of a on b is neither activating nor inhibiting.
|
||||
|
||||
Here is the full state graph of this network under the asynchronous
|
||||
dynamics:
|
||||
#+NAME: simple-bn-sg
|
||||
#+BEGIN_SRC racket :results silent :var simple-bn=munch-table(simple-bn)
|
||||
(let* ([bn (nn (unorg simple-bn))]
|
||||
[bn-asyn (make-asyn-dynamics bn)])
|
||||
(dotit (ppsg (build-full-boolean-state-graph bn-asyn))))
|
||||
#+END_SRC
|
||||
|
||||
#+BEGIN_SRC dot :file dots/examplem7LpTs.svg :results raw drawer :cmd sfdp :noweb yes
|
||||
<<simple-bn-sg()>>
|
||||
#+END_SRC
|
||||
|
||||
#+RESULTS:
|
||||
:RESULTS:
|
||||
[[file:dots/examplem7LpTs.svg]]
|
||||
:END:
|
||||
|
||||
Alternatively, you may prefer a slighty more compact representation
|
||||
of Boolean values as 0 and 1:
|
||||
#+NAME: simple-bn-sg-bool
|
||||
#+BEGIN_SRC racket :results silent :var simple-bn=munch-table(simple-bn)
|
||||
(let* ([bn (nn (unorg simple-bn))]
|
||||
[bn-asyn (make-asyn-dynamics bn)])
|
||||
(dotit (ppsgb (build-full-boolean-state-graph bn-asyn))))
|
||||
#+END_SRC
|
||||
|
||||
#+BEGIN_SRC dot :file dots/examplex1Irnk.svg :results raw drawer :cmd sfdp :noweb yes
|
||||
<<simple-bn-sg-bool()>>
|
||||
#+END_SRC
|
||||
|
||||
#+RESULTS:
|
||||
:RESULTS:
|
||||
[[file:dots/examplex1Irnk.svg]]
|
||||
:END:
|
||||
|
||||
Consider the following state (appearing in the upper left corner of
|
||||
the state graph):
|
||||
|
||||
#+NAME: some-state
|
||||
| a | 0 |
|
||||
| c | 1 |
|
||||
| b | 1 |
|
||||
|
||||
These are the states which can be reached from it in at most 2
|
||||
steps:
|
||||
#+NAME: simple-bn-some-state
|
||||
#+HEADER: :var simple-bn=munch-table(simple-bn)
|
||||
#+HEADER: :var some-state=munch-table(some-state)
|
||||
#+BEGIN_SRC racket :results silent
|
||||
(let* ([bn (nn (unorg simple-bn))]
|
||||
[bn-asyn (make-asyn-dynamics bn)]
|
||||
[s0 (stb (unorg some-state))])
|
||||
(dotit (ppsgb (dds-build-n-step-state-graph bn-asyn (set s0) 2))))
|
||||
#+END_SRC
|
||||
|
||||
#+BEGIN_SRC dot :file dots/examplecHA6gL.svg :results raw drawer :cmd sfdp :noweb yes
|
||||
<<simple-bn-some-state()>>
|
||||
#+END_SRC
|
||||
|
||||
#+RESULTS:
|
||||
:RESULTS:
|
||||
[[file:dots/examplecHA6gL.svg]]
|
||||
:END:
|
||||
|
||||
|
||||
* Local Variables :noexport:
|
||||
# Local Variables:
|
||||
# eval: (auto-fill-mode)
|
||||
|
|
|
|||
Loading…
Reference in New Issue