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Author SHA1 Message Date
Arfon Smith
5847624124 Update JATS dtd (#6020) 
The current DTD for the JATS writer template is for Journal Publishing (JATS-journalpublishing1.dtd), which does not permit ext-link as a valid child (https://jats.nlm.nih.gov/publishing/tag-library/1.1/element/publisher-name.html).

This update modifies the default output template to be the less restrictive JATS archiving and interchange DTD which systems like PubMed use internally to represent their articles.
 2019-12-30 22:18:55 -08:00
John MacFarlane
51933c319b
Merge pull request #5604 from jgm/jats-abstract 
JATS template: add abstract
 2019-07-13 16:43:06 -07:00
Arfon Smith
020e2a06d5 Updating JATS template to v1.1dtd (#5632) 
* Updating JATS template to v1.1dtd

* Update writer.jats
 2019-07-06 23:31:02 +02:00
Mauro Bieg
77ccfa6217
JATS template: add abstract 2019-06-20 15:44:48 +02:00
John MacFarlane
9725522a7f Revert "JATS template: don't include journal-meta unless 'journal'..." 
This reverts commit 193b5cceba.

journal-meta is required.  Better to include it even if it
doesn't validate through lack of required fields.
 2019-06-11 17:31:52 -07:00
John MacFarlane
193b5cceba JATS template: don't include journal-meta unless 'journal'... 
...is set in metadata.

Otherwise we get validation errors.
 2019-06-11 17:08:40 -07:00
John MacFarlane
5bbaedac57 JATS writer: ensure validity of pub-date. 
We try to parse the date and convert to year, month, day,
as expected in pub-date.  We also add an iso-8601-date attribute
if possible.
 2019-06-11 17:01:36 -07:00
John MacFarlane
bb68c183b3 JATS writer: don't embed string-name in string. 
That's illegal with this DTD.
 2019-06-11 16:16:05 -07:00
John MacFarlane
8a3ef99882 JATS template: always include <back> element even if empty. 2017-03-31 15:15:34 +02:00
John MacFarlane
3217bc192e JATS writer: put references in <back>. 
Modified template to include a `<back>` and `<body>` section.
This should give authors more flexibility, e.g. to put
acknowledgements metadata in `<back>`.  References are
automatically extracted and put into `<back>`.
 2017-03-31 11:07:09 +02:00
John MacFarlane
560cfadb92 jats template: added xml-stylesheet variable. 2017-03-30 22:49:22 +02:00
John MacFarlane
64fe39c255 Added default.jats template. 
This is copied from Martin Fenner's pandoc-jats project:
https://github.com/mfenner/pandoc-jats
 2017-03-28 09:38:00 +02:00