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CI: validate JATS table output

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Albert Krewinkel 2020-11-18 17:31:41 +01:00
parent 0306eec5fa
commit 56f607b50b
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1 changed files with 30 additions and 6 deletions
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36
.github/workflows/format-validation.yml vendored
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@ -9,6 +9,7 @@ on:
- 'test/writer.jats_articleauthoring'
- 'test/writer.jats_publishing'
- 'test/writer.jats_archiving'
- 'test/tables.jats_archiving'
pull_request:
branches:
- '*'
@ -17,6 +18,7 @@ on:
- 'test/writer.jats_articleauthoring'
- 'test/writer.jats_publishing'
- 'test/writer.jats_archiving'
- 'test/tables.jats_archiving'
jobs:
jats:
@ -31,19 +33,16 @@ jobs:
- articleauthoring
- publishing
- archiving
file:
- writer
# tables are not supported yet, the files contain only snippets.
steps:
- name: Checkout
uses: actions/checkout@v2
- name: Validate
- name: Validate writer output
run: |
filename=test/${{ matrix.file }}.jats_${{ matrix.tagset }}
filename=test/writer.jats_${{ matrix.tagset }}
printf "Validating file %s\n" "$filename"
json="$(curl --form "xml=@${filename}" --silent "$VALIDATOR_URL")"
err_count="$(echo "$json" | jq '.errors | length')"
err_count="$(printf '%s' "$json" | jq '.errors | length')"
if [ "$err_count" -eq 0 ]; then
printf "File was validated successfully.\n"
exit 0
@ -51,3 +50,28 @@ jobs:
printf "Validator report:\n%s" "$json"
exit 1
fi
- name: Validate tables
# Archiving has the simplest template, so we only check with that.
if: matrix.tagset == 'archiving'
run: |
tmpl="$(cat <<EOF
<?xml version="1.0" encoding="utf-8" ?>
<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD v1.2 20190208//EN"
"JATS-archivearticle1.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="1.2" article-type="other">
<front><article-meta></article-meta></front>
<body>%s</body></article>
EOF
)"
jats_file="$(mktemp jats-tables.XXXXX)"
printf "$tmpl" "$(cat test/tables.jats_archiving)" > "$jats_file"
json="$(curl --form "xml=@${jats_file}" --silent "$VALIDATOR_URL")"
err_count="$(printf "%s" "$json" | jq '.errors | length')"
if [ "$err_count" -eq 0 ]; then
printf "Table output is valid when used as body content.\n"
exit 0
else
printf "Validator report:\n%s" "$json"
exit 1
fi